map | span (upstream; downstream) | [x-link sites] used in map | [x-link sites] % of total | [x-link sites] % of used in any map | [single hits in whole-genome, cDNA counts] used in map | [single hits in whole-genome, cDNA counts] % of total | [single hits in whole-genome, cDNA counts] % of used in any map |
---|---|---|---|---|---|---|---|
exon-intron | -300; 300 | 524 | 7.77% | 25.27% | 543 | 7.67% | 25.24% |
intron-exon | -300; 300 | 405 | 6.01% | 19.53% | 419 | 5.92% | 19.48% |
5-ncRNA | -1000; 300 | 128 | 1.90% | 6.17% | 133 | 1.88% | 6.18% |
ncRNA-3 | -300; 1000 | 160 | 2.37% | 7.71% | 170 | 2.40% | 7.90% |
ORF-3UTR | -300; 300 | 362 | 5.37% | 17.45% | 376 | 5.31% | 17.48% |
5UTR-ORF | -300; 300 | 7 | 0.10% | 0.34% | 9 | 0.13% | 0.42% |
inter-5UTR | -1000; 300 | 27 | 0.40% | 1.30% | 29 | 0.41% | 1.35% |
3UTR-inter | -300; 1000 | 406 | 6.02% | 19.58% | 415 | 5.86% | 19.29% |
inter-5 | -1000; 300 | 111 | 1.65% | 5.35% | 118 | 1.67% | 5.49% |
3-inter | -300; 1000 | 536 | 7.95% | 25.84% | 555 | 7.84% | 25.80% |
BP best in intron | -300; 100 | 190 | 2.82% | 9.16% | 196 | 2.77% | 9.11% |
strand | [x-link sites] used in map | [x-link sites] % of total | [x-link sites] % of used in any map | [x-link sites] % of used in map | unique [junctions] in map | [x-link sites] per unique [junction] |
---|---|---|---|---|---|---|
same | 503 | 7.46% | 24.25% | 95.99% | 473 | 1.03074 |
anti | 21 | 0.31% | 1.01% | 4.01% | 15 | 0.0430328 |
both | 524 | 7.77% | 25.27% | 100.00% | 488 | 1.07377 |
strand | [single hits in whole-genome, cDNA counts] used in map | [single hits in whole-genome, cDNA counts] % of total | [single hits in whole-genome, cDNA counts] % of used in any map | [single hits in whole-genome, cDNA counts] % of used in map | unique [junctions] in map | [single hits in whole-genome, cDNA counts] per unique [junction] |
same | 519 | 7.33% | 24.13% | 95.58% | 473 | 1.06352 |
anti | 24 | 0.34% | 1.12% | 4.42% | 15 | 0.0491803 |
both | 543 | 7.67% | 25.24% | 100.00% | 488 | 1.1127 |
Top 10 junctions with largest x-link sites sum (both strands)
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Top 10 junctions with largest [single hits in whole-genome, cDNA counts] sum (both strands)
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strand | [x-link sites] used in map | [x-link sites] % of total | [x-link sites] % of used in any map | [x-link sites] % of used in map | unique [junctions] in map | [x-link sites] per unique [junction] |
---|---|---|---|---|---|---|
same | 390 | 5.78% | 18.80% | 96.30% | 359 | 1.04839 |
anti | 15 | 0.22% | 0.72% | 3.70% | 13 | 0.0403226 |
both | 405 | 6.01% | 19.53% | 100.00% | 372 | 1.08871 |
strand | [single hits in whole-genome, cDNA counts] used in map | [single hits in whole-genome, cDNA counts] % of total | [single hits in whole-genome, cDNA counts] % of used in any map | [single hits in whole-genome, cDNA counts] % of used in map | unique [junctions] in map | [single hits in whole-genome, cDNA counts] per unique [junction] |
same | 403 | 5.69% | 18.74% | 96.18% | 359 | 1.08333 |
anti | 16 | 0.23% | 0.74% | 3.82% | 13 | 0.0430108 |
both | 419 | 5.92% | 19.48% | 100.00% | 372 | 1.12634 |
Top 10 junctions with largest x-link sites sum (both strands)
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Top 10 junctions with largest [single hits in whole-genome, cDNA counts] sum (both strands)
|
strand | [x-link sites] used in map | [x-link sites] % of total | [x-link sites] % of used in any map | [x-link sites] % of used in map | unique [junctions] in map | [x-link sites] per unique [junction] |
---|---|---|---|---|---|---|
same | 61 | 0.90% | 2.94% | 47.66% | 31 | 0.677778 |
anti | 67 | 0.99% | 3.23% | 52.34% | 59 | 0.744444 |
both | 128 | 1.90% | 6.17% | 100.00% | 90 | 1.42222 |
strand | [single hits in whole-genome, cDNA counts] used in map | [single hits in whole-genome, cDNA counts] % of total | [single hits in whole-genome, cDNA counts] % of used in any map | [single hits in whole-genome, cDNA counts] % of used in map | unique [junctions] in map | [single hits in whole-genome, cDNA counts] per unique [junction] |
same | 62 | 0.88% | 2.88% | 46.62% | 31 | 0.688889 |
anti | 71 | 1.00% | 3.30% | 53.38% | 59 | 0.788889 |
both | 133 | 1.88% | 6.18% | 100.00% | 90 | 1.47778 |
Top 10 junctions with largest x-link sites sum (both strands)
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Top 10 junctions with largest [single hits in whole-genome, cDNA counts] sum (both strands)
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strand | [x-link sites] used in map | [x-link sites] % of total | [x-link sites] % of used in any map | [x-link sites] % of used in map | unique [junctions] in map | [x-link sites] per unique [junction] |
---|---|---|---|---|---|---|
same | 132 | 1.96% | 6.36% | 82.50% | 88 | 1.14783 |
anti | 28 | 0.42% | 1.35% | 17.50% | 27 | 0.243478 |
both | 160 | 2.37% | 7.71% | 100.00% | 115 | 1.3913 |
strand | [single hits in whole-genome, cDNA counts] used in map | [single hits in whole-genome, cDNA counts] % of total | [single hits in whole-genome, cDNA counts] % of used in any map | [single hits in whole-genome, cDNA counts] % of used in map | unique [junctions] in map | [single hits in whole-genome, cDNA counts] per unique [junction] |
same | 141 | 1.99% | 6.56% | 82.94% | 88 | 1.22609 |
anti | 29 | 0.41% | 1.35% | 17.06% | 27 | 0.252174 |
both | 170 | 2.40% | 7.90% | 100.00% | 115 | 1.47826 |
Top 10 junctions with largest x-link sites sum (both strands)
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Top 10 junctions with largest [single hits in whole-genome, cDNA counts] sum (both strands)
|
strand | [x-link sites] used in map | [x-link sites] % of total | [x-link sites] % of used in any map | [x-link sites] % of used in map | unique [junctions] in map | [x-link sites] per unique [junction] |
---|---|---|---|---|---|---|
same | 359 | 5.32% | 17.31% | 99.17% | 276 | 1.28674 |
anti | 3 | 0.04% | 0.14% | 0.83% | 3 | 0.0107527 |
both | 362 | 5.37% | 17.45% | 100.00% | 279 | 1.29749 |
strand | [single hits in whole-genome, cDNA counts] used in map | [single hits in whole-genome, cDNA counts] % of total | [single hits in whole-genome, cDNA counts] % of used in any map | [single hits in whole-genome, cDNA counts] % of used in map | unique [junctions] in map | [single hits in whole-genome, cDNA counts] per unique [junction] |
same | 373 | 5.27% | 17.34% | 99.20% | 276 | 1.33692 |
anti | 3 | 0.04% | 0.14% | 0.80% | 3 | 0.0107527 |
both | 376 | 5.31% | 17.48% | 100.00% | 279 | 1.34767 |
Top 10 junctions with largest x-link sites sum (both strands)
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Top 10 junctions with largest [single hits in whole-genome, cDNA counts] sum (both strands)
|
strand | [x-link sites] used in map | [x-link sites] % of total | [x-link sites] % of used in any map | [x-link sites] % of used in map | unique [junctions] in map | [x-link sites] per unique [junction] |
---|---|---|---|---|---|---|
same | 6 | 0.09% | 0.29% | 85.71% | 6 | 0.857143 |
anti | 1 | 0.01% | 0.05% | 14.29% | 1 | 0.142857 |
both | 7 | 0.10% | 0.34% | 100.00% | 7 | 1 |
strand | [single hits in whole-genome, cDNA counts] used in map | [single hits in whole-genome, cDNA counts] % of total | [single hits in whole-genome, cDNA counts] % of used in any map | [single hits in whole-genome, cDNA counts] % of used in map | unique [junctions] in map | [single hits in whole-genome, cDNA counts] per unique [junction] |
same | 8 | 0.11% | 0.37% | 88.89% | 6 | 1.14286 |
anti | 1 | 0.01% | 0.05% | 11.11% | 1 | 0.142857 |
both | 9 | 0.13% | 0.42% | 100.00% | 7 | 1.28571 |
Top 10 junctions with largest x-link sites sum (both strands)
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Top 10 junctions with largest [single hits in whole-genome, cDNA counts] sum (both strands)
|
strand | [x-link sites] used in map | [x-link sites] % of total | [x-link sites] % of used in any map | [x-link sites] % of used in map | unique [junctions] in map | [x-link sites] per unique [junction] |
---|---|---|---|---|---|---|
same | 10 | 0.15% | 0.48% | 37.04% | 10 | 0.37037 |
anti | 17 | 0.25% | 0.82% | 62.96% | 17 | 0.62963 |
both | 27 | 0.40% | 1.30% | 100.00% | 27 | 1 |
strand | [single hits in whole-genome, cDNA counts] used in map | [single hits in whole-genome, cDNA counts] % of total | [single hits in whole-genome, cDNA counts] % of used in any map | [single hits in whole-genome, cDNA counts] % of used in map | unique [junctions] in map | [single hits in whole-genome, cDNA counts] per unique [junction] |
same | 12 | 0.17% | 0.56% | 41.38% | 10 | 0.444444 |
anti | 17 | 0.24% | 0.79% | 58.62% | 17 | 0.62963 |
both | 29 | 0.41% | 1.35% | 100.00% | 27 | 1.07407 |
Top 10 junctions with largest x-link sites sum (both strands)
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Top 10 junctions with largest [single hits in whole-genome, cDNA counts] sum (both strands)
|
strand | [x-link sites] used in map | [x-link sites] % of total | [x-link sites] % of used in any map | [x-link sites] % of used in map | unique [junctions] in map | [x-link sites] per unique [junction] |
---|---|---|---|---|---|---|
same | 357 | 5.30% | 17.21% | 87.93% | 288 | 1.09846 |
anti | 49 | 0.73% | 2.36% | 12.07% | 37 | 0.150769 |
both | 406 | 6.02% | 19.58% | 100.00% | 325 | 1.24923 |
strand | [single hits in whole-genome, cDNA counts] used in map | [single hits in whole-genome, cDNA counts] % of total | [single hits in whole-genome, cDNA counts] % of used in any map | [single hits in whole-genome, cDNA counts] % of used in map | unique [junctions] in map | [single hits in whole-genome, cDNA counts] per unique [junction] |
same | 365 | 5.16% | 16.97% | 87.95% | 288 | 1.12308 |
anti | 50 | 0.71% | 2.32% | 12.05% | 37 | 0.153846 |
both | 415 | 5.86% | 19.29% | 100.00% | 325 | 1.27692 |
Top 10 junctions with largest x-link sites sum (both strands)
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Top 10 junctions with largest [single hits in whole-genome, cDNA counts] sum (both strands)
|
strand | [x-link sites] used in map | [x-link sites] % of total | [x-link sites] % of used in any map | [x-link sites] % of used in map | unique [junctions] in map | [x-link sites] per unique [junction] |
---|---|---|---|---|---|---|
same | 29 | 0.43% | 1.40% | 26.13% | 24 | 0.305263 |
anti | 82 | 1.22% | 3.95% | 73.87% | 71 | 0.863158 |
both | 111 | 1.65% | 5.35% | 100.00% | 95 | 1.16842 |
strand | [single hits in whole-genome, cDNA counts] used in map | [single hits in whole-genome, cDNA counts] % of total | [single hits in whole-genome, cDNA counts] % of used in any map | [single hits in whole-genome, cDNA counts] % of used in map | unique [junctions] in map | [single hits in whole-genome, cDNA counts] per unique [junction] |
same | 31 | 0.44% | 1.44% | 26.27% | 24 | 0.326316 |
anti | 87 | 1.23% | 4.04% | 73.73% | 71 | 0.915789 |
both | 118 | 1.67% | 5.49% | 100.00% | 95 | 1.24211 |
Top 10 junctions with largest x-link sites sum (both strands)
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Top 10 junctions with largest [single hits in whole-genome, cDNA counts] sum (both strands)
|
strand | [x-link sites] used in map | [x-link sites] % of total | [x-link sites] % of used in any map | [x-link sites] % of used in map | unique [junctions] in map | [x-link sites] per unique [junction] |
---|---|---|---|---|---|---|
same | 460 | 6.82% | 22.18% | 85.82% | 346 | 1.13022 |
anti | 76 | 1.13% | 3.66% | 14.18% | 61 | 0.186732 |
both | 536 | 7.95% | 25.84% | 100.00% | 407 | 1.31695 |
strand | [single hits in whole-genome, cDNA counts] used in map | [single hits in whole-genome, cDNA counts] % of total | [single hits in whole-genome, cDNA counts] % of used in any map | [single hits in whole-genome, cDNA counts] % of used in map | unique [junctions] in map | [single hits in whole-genome, cDNA counts] per unique [junction] |
same | 476 | 6.73% | 22.13% | 85.77% | 346 | 1.16953 |
anti | 79 | 1.12% | 3.67% | 14.23% | 61 | 0.194103 |
both | 555 | 7.84% | 25.80% | 100.00% | 407 | 1.36364 |
Top 10 junctions with largest x-link sites sum (both strands)
|
Top 10 junctions with largest [single hits in whole-genome, cDNA counts] sum (both strands)
|
strand | [x-link sites] used in map | [x-link sites] % of total | [x-link sites] % of used in any map | [x-link sites] % of used in map | unique [BPs] in map | [x-link sites] per unique [BP] |
---|---|---|---|---|---|---|
same | 182 | 2.70% | 8.78% | 95.79% | 177 | 0.98913 |
anti | 8 | 0.12% | 0.39% | 4.21% | 7 | 0.0434783 |
both | 190 | 2.82% | 9.16% | 100.00% | 184 | 1.03261 |
strand | [single hits in whole-genome, cDNA counts] used in map | [single hits in whole-genome, cDNA counts] % of total | [single hits in whole-genome, cDNA counts] % of used in any map | [single hits in whole-genome, cDNA counts] % of used in map | unique [BPs] in map | [single hits in whole-genome, cDNA counts] per unique [BP] |
same | 188 | 2.66% | 8.74% | 95.92% | 177 | 1.02174 |
anti | 8 | 0.11% | 0.37% | 4.08% | 7 | 0.0434783 |
both | 196 | 2.77% | 9.11% | 100.00% | 184 | 1.06522 |
Top 10 BPs with largest x-link sites sum (both strands)
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Top 10 BPs with largest [single hits in whole-genome, cDNA counts] sum (both strands)
|